Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LdlrP35951 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.36□□□□□ -1.39
LdlrP35951 Snord88a-201ENSMUST00000116723 90 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm14554-201ENSMUST00000119548 661 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm12577-201ENSMUST00000119701 574 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm11553-201ENSMUST00000120682 240 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm12540-201ENSMUST00000121938 319 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm11834-201ENSMUST00000122257 585 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.36□□□□□ -1.39
LdlrP35951 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Gm22518-201ENSMUST00000158267 68 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm23773-201ENSMUST00000158985 296 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm26607-201ENSMUST00000180661 867 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm28885-201ENSMUST00000185615 563 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm20926-201ENSMUST00000194457 696 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm43459-201ENSMUST00000202093 331 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm5885-202ENSMUST00000203357 528 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm44243-201ENSMUST00000204323 692 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
LdlrP35951 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm4042-201ENSMUST00000216946 637 ntBASIC6.36□□□□□ -1.39
LdlrP35951 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm19233-201ENSMUST00000219772 936 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 AC144733.1-201ENSMUST00000222893 1289 ntBASIC6.36□□□□□ -1.39
LdlrP35951 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Mir3068-201ENSMUST00000083004 136 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.36□□□□□ -1.39
LdlrP35951 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.36□□□□□ -1.39
LdlrP35951 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
LdlrP35951 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
LdlrP35951 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
LdlrP35951 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.35□□□□□ -1.39
LdlrP35951 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Mir674-201ENSMUST00000102421 100 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm23979-201ENSMUST00000104071 128 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm11462-201ENSMUST00000117749 562 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm12135-201ENSMUST00000119170 466 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm14906-201ENSMUST00000119265 390 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC6.35□□□□□ -1.39
LdlrP35951 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm16363-201ENSMUST00000132460 877 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.35□□□□□ -1.39
LdlrP35951 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm24435-201ENSMUST00000157886 110 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Gm22990-201ENSMUST00000175427 89 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Mir7685-201ENSMUST00000183555 62 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm28996-201ENSMUST00000190316 721 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm37103-201ENSMUST00000191830 115 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm37376-201ENSMUST00000192176 453 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm19739-201ENSMUST00000195941 153 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm9504-201ENSMUST00000196322 468 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm42857-201ENSMUST00000200823 339 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm9367-201ENSMUST00000205703 546 ntBASIC6.35□□□□□ -1.39
LdlrP35951 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.35□□□□□ -1.39
LdlrP35951 Gm45240-201ENSMUST00000211437 674 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.35□□□□□ -1.39
LdlrP35951 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LdlrP35951 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms