Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.08□□□□□ -1.44
Lire1P11260 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.07□□□□□ -1.44
Lire1P11260 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.07□□□□□ -1.44
Lire1P11260 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm37393-201ENSMUST00000195118 3870 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm22953-201ENSMUST00000116724 101 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm15164-201ENSMUST00000122203 271 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm16248-201ENSMUST00000124238 243 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.07□□□□□ -1.44
Lire1P11260 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Gm7281-201ENSMUST00000160010 543 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm28665-201ENSMUST00000189269 670 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm6074-201ENSMUST00000193340 451 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm44837-201ENSMUST00000206863 717 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Gm3678-201ENSMUST00000218888 492 ntBASIC6.07□□□□□ -1.44
Lire1P11260 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC6.07□□□□□ -1.44
Lire1P11260 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lire1P11260 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lire1P11260 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lire1P11260 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.07□□□□□ -1.44
Lire1P11260 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Lire1P11260 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lire1P11260 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Lire1P11260 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lire1P11260 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Lire1P11260 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.06□□□□□ -1.44
Lire1P11260 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.06□□□□□ -1.44
Lire1P11260 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Gm27601-201ENSMUST00000184794 127 ntBASIC6.06□□□□□ -1.44
Lire1P11260 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.06□□□□□ -1.44
Lire1P11260 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Lire1P11260 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Gm9367-201ENSMUST00000205703 546 ntBASIC6.06□□□□□ -1.44
Lire1P11260 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Lire1P11260 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lire1P11260 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lire1P11260 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.06□□□□□ -1.44
Lire1P11260 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.06□□□□□ -1.44
Lire1P11260 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Lire1P11260 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.06□□□□□ -1.44
Lire1P11260 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.06□□□□□ -1.44
Lire1P11260 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms