Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm25564-201ENSMUST00000104604 132 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm14772-201ENSMUST00000116562 514 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm13998-201ENSMUST00000120952 335 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm16164-201ENSMUST00000160078 468 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm24081-201ENSMUST00000175177 125 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm20778-201ENSMUST00000178524 627 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm18799-201ENSMUST00000189104 913 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm18467-201ENSMUST00000208805 434 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm45724-201ENSMUST00000213031 420 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm24454-201ENSMUST00000083349 132 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.49□□□□□ -1.37
Chmp6P0C0A3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm7146-201ENSMUST00000116079 739 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm17121-201ENSMUST00000170414 847 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm17222-201ENSMUST00000180135 847 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm3650-201ENSMUST00000180600 747 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm29551-201ENSMUST00000190913 698 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm32158-201ENSMUST00000200135 404 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm44162-201ENSMUST00000203543 544 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm19182-201ENSMUST00000207139 577 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm10688-201ENSMUST00000214985 520 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm7802-201ENSMUST00000216464 262 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm18940-201ENSMUST00000222518 871 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms