Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm43554-201ENSMUST00000199987 186 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm18007-201ENSMUST00000205019 844 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm28392-201ENSMUST00000077630 393 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm16415-201ENSMUST00000080097 489 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm12494-201ENSMUST00000121684 521 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm23546-201ENSMUST00000158211 137 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm42961-201ENSMUST00000202023 181 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm44213-201ENSMUST00000204977 703 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Gm20368-201ENSMUST00000220716 301 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Zfp429-203ENSMUST00000224684 524 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.04□□□□□ -1.6
Col6a4A2AX52 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a4A2AX52 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm24886-201ENSMUST00000104384 123 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm23031-201ENSMUST00000157998 119 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm7335-201ENSMUST00000172475 373 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm18444-201ENSMUST00000191239 629 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm18036-201ENSMUST00000195256 272 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Mir1188-201ENSMUST00000116756 120 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm14106-201ENSMUST00000119382 438 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm6061-201ENSMUST00000175860 492 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.03□□□□□ -1.6
Col6a4A2AX52 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms