Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm27005-201ENSMUST00000182783 921 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm37477-201ENSMUST00000195215 884 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm23311-201ENSMUST00000104152 134 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm13311-201ENSMUST00000117863 379 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm6884-201ENSMUST00000119318 615 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm12307-201ENSMUST00000120581 590 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm23954-201ENSMUST00000157213 353 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm17121-201ENSMUST00000170414 847 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm17222-201ENSMUST00000180135 847 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Mir6244-201ENSMUST00000184156 117 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm37901-201ENSMUST00000195107 514 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm44075-201ENSMUST00000204208 216 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm18940-201ENSMUST00000222518 871 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm6990-201ENSMUST00000086830 348 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim3Q9R1R2 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.71□□□□□ -1.49
Trim3Q9R1R2 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.71□□□□□ -1.49
Trim3Q9R1R2 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim3Q9R1R2 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim3Q9R1R2 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.71□□□□□ -1.49
Trim3Q9R1R2 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim3Q9R1R2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim3Q9R1R2 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim3Q9R1R2 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms