Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm25917-201ENSMUST00000104267 130 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm8692-201ENSMUST00000118102 438 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm13818-201ENSMUST00000119441 511 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm12399-201ENSMUST00000121475 446 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm15237-201ENSMUST00000122104 469 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm3076-201ENSMUST00000161613 451 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm3650-201ENSMUST00000180600 747 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm6693-201ENSMUST00000189583 813 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm43744-201ENSMUST00000196387 688 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm32158-201ENSMUST00000200135 404 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm18290-201ENSMUST00000202900 844 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Gm6070-201ENSMUST00000207275 419 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdc40Q9DC48 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm14098-201ENSMUST00000119295 623 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm21990-201ENSMUST00000124692 383 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm27460-201ENSMUST00000184213 100 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm38122-201ENSMUST00000192679 885 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm8256-203ENSMUST00000228692 591 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdc40Q9DC48 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms