Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm12307-201ENSMUST00000120581 590 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm8317-201ENSMUST00000121261 471 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm17121-201ENSMUST00000170414 847 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm20778-201ENSMUST00000178524 627 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm17222-201ENSMUST00000180135 847 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm21542-201ENSMUST00000182307 993 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm31211-201ENSMUST00000199170 253 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm42983-201ENSMUST00000199879 815 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm8290-201ENSMUST00000218202 477 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm18405-201ENSMUST00000220743 511 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm6990-201ENSMUST00000086830 348 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.28□□□□□ -1.4
Prpf39Q8K2Z2 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm4234-201ENSMUST00000119747 714 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm15187-201ENSMUST00000122329 264 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm22214-201ENSMUST00000157563 172 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm18350-201ENSMUST00000187395 955 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm3351-201ENSMUST00000193454 505 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm36378-201ENSMUST00000201709 388 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Prpf39Q8K2Z2 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms