Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm14529-201ENSMUST00000117894 406 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm11617-201ENSMUST00000119609 639 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm28186-201ENSMUST00000187447 679 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm9292-201ENSMUST00000222008 710 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm19195-201ENSMUST00000222018 511 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gm24454-201ENSMUST00000083349 132 ntBASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Nup88Q8CEC0 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Mir700-201ENSMUST00000102169 79 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm14173-201ENSMUST00000117690 278 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm12099-201ENSMUST00000118660 750 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm4342-201ENSMUST00000118982 367 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Mir6362-201ENSMUST00000184329 107 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm8009-201ENSMUST00000191672 436 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm38122-201ENSMUST00000192679 885 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nup88Q8CEC0 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Nup88Q8CEC0 Gm37775-201ENSMUST00000194120 2313 ntBASIC7.09□□□□□ -1.28
Nup88Q8CEC0 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm27193-201ENSMUST00000184217 586 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nup88Q8CEC0 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.08□□□□□ -1.28
Nup88Q8CEC0 Gm42581-201ENSMUST00000201774 966 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms