Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm44735-201ENSMUST00000206197 1752 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm43874-201ENSMUST00000204853 2798 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm37082-201ENSMUST00000192629 1927 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm37474-201ENSMUST00000194812 1814 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm15078-201ENSMUST00000118371 782 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm16423-201ENSMUST00000120078 947 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm15877-201ENSMUST00000121897 964 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm20549-201ENSMUST00000174804 429 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm37235-201ENSMUST00000195171 59 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm20786-201ENSMUST00000212649 436 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 AC124445.1-201ENSMUST00000218613 452 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm43627-201ENSMUST00000197119 2299 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm4954-201ENSMUST00000135069 1601 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp47Q8BY87 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp47Q8BY87 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC8.38□□□□□ -1.07
Usp47Q8BY87 Gm11242-201ENSMUST00000120103 2457 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm15233-201ENSMUST00000118747 400 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm14679-201ENSMUST00000121536 722 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm27679-201ENSMUST00000184612 84 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm8930-201ENSMUST00000201693 768 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm8290-201ENSMUST00000218202 477 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm8613-201ENSMUST00000220383 1077 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp47Q8BY87 n-R5s161-201ENSMUST00000083728 114 ntBASIC8.37□□□□□ -1.07
Usp47Q8BY87 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp47Q8BY87 Gm37686-201ENSMUST00000194099 2309 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm11984-201ENSMUST00000118142 766 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm22959-201ENSMUST00000122514 303 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm22636-201ENSMUST00000158142 275 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm18343-201ENSMUST00000172802 604 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm37024-201ENSMUST00000192224 868 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm43215-201ENSMUST00000199108 252 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 AC102287.1-201ENSMUST00000211412 454 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp47Q8BY87 AC117797.1-201ENSMUST00000223977 695 ntBASIC8.36□□□□□ -1.07
Usp47Q8BY87 AC154556.1-201ENSMUST00000224587 885 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms