Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm26289-201ENSMUST00000104169 131 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm25564-201ENSMUST00000104604 132 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm14173-201ENSMUST00000117690 278 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm11445-201ENSMUST00000119101 532 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm2986-201ENSMUST00000121603 382 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm24236-201ENSMUST00000157794 134 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Mir5107-201ENSMUST00000175586 88 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm43354-201ENSMUST00000196862 346 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm43850-201ENSMUST00000202021 578 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm7351-201ENSMUST00000210745 580 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm23927-201ENSMUST00000082466 215 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc40Q8BI79 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm8692-201ENSMUST00000118102 438 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm6654-201ENSMUST00000118950 348 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm8312-201ENSMUST00000119380 618 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm12399-201ENSMUST00000121475 446 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm18700-201ENSMUST00000185791 553 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm37758-201ENSMUST00000194275 629 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm43203-201ENSMUST00000200130 558 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm32158-201ENSMUST00000200135 404 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm17834-201ENSMUST00000204322 891 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Gm45156-201ENSMUST00000207255 439 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.37□□□□□ -1.39
Ccdc40Q8BI79 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms