Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm7609-204ENSMUST00000161424 461 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm38840-201ENSMUST00000204716 843 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Spg11Q3UHA3 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm21399-201ENSMUST00000180210 597 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm9386-201ENSMUST00000095195 381 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Grik1-210ENSMUST00000228034 2708 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm25422-201ENSMUST00000104219 129 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm13222-201ENSMUST00000119638 138 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm15490-201ENSMUST00000119894 387 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm23327-201ENSMUST00000157420 78 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm20056-201ENSMUST00000194813 519 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm36448-201ENSMUST00000199916 438 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Gm46191-201ENSMUST00000218899 433 ntBASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Spg11Q3UHA3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.59□□□□□ -1.52
Spg11Q3UHA3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.59□□□□□ -1.52
Spg11Q3UHA3 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Spg11Q3UHA3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Spg11Q3UHA3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Gm6541-201ENSMUST00000165542 561 ntBASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Gm9671-201ENSMUST00000171502 547 ntBASIC5.58□□□□□ -1.52
Spg11Q3UHA3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms