Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CiitaP79621 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm6754-201ENSMUST00000117124 913 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm13338-201ENSMUST00000120235 361 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm24382-201ENSMUST00000122698 107 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm14349-201ENSMUST00000137155 902 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm25342-201ENSMUST00000157459 122 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm29111-201ENSMUST00000188823 696 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm28973-201ENSMUST00000189310 613 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm28584-201ENSMUST00000191489 696 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm38138-201ENSMUST00000193274 696 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm37991-201ENSMUST00000194297 696 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm43222-201ENSMUST00000199013 603 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.62□□□□□ -1.35
CiitaP79621 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.62□□□□□ -1.35
CiitaP79621 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.62□□□□□ -1.35
CiitaP79621 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.62□□□□□ -1.35
CiitaP79621 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
CiitaP79621 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CiitaP79621 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CiitaP79621 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CiitaP79621 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CiitaP79621 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CiitaP79621 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.62□□□□□ -1.35
CiitaP79621 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Mir449c-201ENSMUST00000102192 109 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Gm11852-201ENSMUST00000120806 222 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Gm6067-201ENSMUST00000121648 491 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.61□□□□□ -1.35
CiitaP79621 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm24741-201ENSMUST00000158857 106 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.61□□□□□ -1.35
CiitaP79621 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Mir6362-201ENSMUST00000184329 107 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Gm31211-201ENSMUST00000199170 253 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Gm2926-201ENSMUST00000205625 239 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.61□□□□□ -1.35
CiitaP79621 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.61□□□□□ -1.35
CiitaP79621 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.61□□□□□ -1.35
CiitaP79621 Gm3785-201ENSMUST00000221000 202 ntBASIC6.61□□□□□ -1.35
CiitaP79621 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.61□□□□□ -1.35
CiitaP79621 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.61□□□□□ -1.35
CiitaP79621 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CiitaP79621 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms