Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm23632-201ENSMUST00000175289 125 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Mir6362-201ENSMUST00000184329 107 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdh11P55288 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm37809-201ENSMUST00000195050 931 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Gm43354-201ENSMUST00000196862 346 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm44253-201ENSMUST00000203387 628 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm19885-201ENSMUST00000212853 343 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm6436-201ENSMUST00000077163 451 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Gm26063-201ENSMUST00000083378 107 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Cdh11P55288 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdh11P55288 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.55□□□□□ -1.52
Cdh11P55288 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdh11P55288 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm25346-201ENSMUST00000104509 128 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm22953-201ENSMUST00000116724 101 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm13772-201ENSMUST00000118431 317 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm9005-201ENSMUST00000119908 607 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm11879-201ENSMUST00000121885 702 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm26037-201ENSMUST00000158150 311 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm23116-201ENSMUST00000158481 67 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm10410-201ENSMUST00000180138 384 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm26898-201ENSMUST00000181678 384 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm8009-201ENSMUST00000191672 436 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm43044-201ENSMUST00000198091 379 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdh11P55288 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm7832-201ENSMUST00000202613 880 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm44548-201ENSMUST00000208929 192 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Gm6009-201ENSMUST00000210848 280 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm19073-201ENSMUST00000219978 555 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Gm9237-201ENSMUST00000221499 548 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdh11P55288 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.54□□□□□ -1.52
Cdh11P55288 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdh11P55288 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdh11P55288 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms