Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Mir688-201ENSMUST00000102055 75 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm14279-201ENSMUST00000117142 332 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm10243-201ENSMUST00000117571 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm10241-201ENSMUST00000117664 286 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm13815-201ENSMUST00000119963 412 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm14939-201ENSMUST00000120347 680 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm11688-201ENSMUST00000122145 308 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.99□□□□□ -1.13
Rfx1P48377 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.99□□□□□ -1.13
Rfx1P48377 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm22948-201ENSMUST00000158561 243 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm6472-201ENSMUST00000178147 651 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm5473-201ENSMUST00000179326 642 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm18698-201ENSMUST00000192327 668 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm18150-201ENSMUST00000195341 645 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm21054-201ENSMUST00000203981 380 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Gm18484-201ENSMUST00000204389 991 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm10126-201ENSMUST00000221732 168 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Vmn1r89-206ENSMUST00000227319 985 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm10247-201ENSMUST00000090395 333 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rfx1P48377 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm37311-201ENSMUST00000195541 2024 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Rfx1P48377 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm13798-201ENSMUST00000118285 139 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm11212-201ENSMUST00000118337 618 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC7.98□□□□□ -1.13
Rfx1P48377 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm12331-201ENSMUST00000119927 622 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm15007-201ENSMUST00000119982 710 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm15141-201ENSMUST00000121860 729 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm23222-201ENSMUST00000158117 76 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm21524-201ENSMUST00000190499 696 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm37493-201ENSMUST00000193167 433 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm42883-201ENSMUST00000202594 222 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Gm45122-201ENSMUST00000206376 784 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rfx1P48377 Gm45514-201ENSMUST00000211531 689 ntBASIC7.98□□□□□ -1.13
Rfx1P48377 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC7.98□□□□□ -1.13
Rfx1P48377 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms