Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm11256-201ENSMUST00000118109 829 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm13626-201ENSMUST00000119435 402 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm15181-201ENSMUST00000120142 177 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm22223-201ENSMUST00000157360 125 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm22428-201ENSMUST00000158554 132 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm18808-201ENSMUST00000173316 462 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox6P40645 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm19124-201ENSMUST00000191041 832 ntBASIC5.64□□□□□ -1.51
Sox6P40645 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm43928-201ENSMUST00000203737 409 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm6009-201ENSMUST00000210848 280 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox6P40645 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Sox6P40645 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.64□□□□□ -1.51
Sox6P40645 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Gm26442-201ENSMUST00000082588 153 ntBASIC5.64□□□□□ -1.51
Sox6P40645 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox6P40645 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox6P40645 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.64□□□□□ -1.51
Sox6P40645 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox6P40645 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox6P40645 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.63□□□□□ -1.51
Sox6P40645 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox6P40645 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Gm25346-201ENSMUST00000104509 128 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm12442-201ENSMUST00000118372 338 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm11609-201ENSMUST00000121926 793 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox6P40645 Gm23757-201ENSMUST00000158353 100 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm16112-201ENSMUST00000159075 382 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox6P40645 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm26557-201ENSMUST00000180756 493 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm27037-201ENSMUST00000182270 960 ntBASIC5.63□□□□□ -1.51
Sox6P40645 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.63□□□□□ -1.51
Sox6P40645 Gm8869-201ENSMUST00000195222 947 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm44374-201ENSMUST00000199821 140 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm44163-201ENSMUST00000205140 475 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox6P40645 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.63□□□□□ -1.51
Sox6P40645 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.63□□□□□ -1.51
Sox6P40645 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.63□□□□□ -1.51
Sox6P40645 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.63□□□□□ -1.51
Sox6P40645 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Mir3068-201ENSMUST00000083004 136 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox6P40645 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox6P40645 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.63□□□□□ -1.51
Sox6P40645 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox6P40645 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
Sox6P40645 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox6P40645 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox6P40645 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.62□□□□□ -1.51
Sox6P40645 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox6P40645 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox6P40645 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox6P40645 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms