Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.28□□□□□ -1.4
Cxcl12P40224 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cxcl12P40224 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cxcl12P40224 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cxcl12P40224 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cxcl12P40224 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cxcl12P40224 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.28□□□□□ -1.4
Cxcl12P40224 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Cxcl12P40224 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm13531-201ENSMUST00000121893 543 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm12293-201ENSMUST00000121898 590 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm26172-201ENSMUST00000158421 134 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Vis1-201ENSMUST00000183957 201 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm29376-201ENSMUST00000189357 835 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm43516-201ENSMUST00000196891 322 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm44837-201ENSMUST00000206863 717 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm40692-201ENSMUST00000220411 491 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm5087-204ENSMUST00000225820 645 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm16415-201ENSMUST00000080097 489 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.27□□□□□ -1.41
Cxcl12P40224 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cxcl12P40224 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cxcl12P40224 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm14175-201ENSMUST00000119835 241 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm23965-201ENSMUST00000157969 142 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm3053-201ENSMUST00000161709 616 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm17149-201ENSMUST00000164712 375 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm5430-201ENSMUST00000182525 915 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Mir6417-201ENSMUST00000183815 116 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm5334-201ENSMUST00000187472 720 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm17981-201ENSMUST00000191109 739 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm44494-201ENSMUST00000196760 129 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm7733-201ENSMUST00000199038 919 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm7368-201ENSMUST00000213307 367 ntBASIC6.26□□□□□ -1.41
Cxcl12P40224 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.26□□□□□ -1.41
Cxcl12P40224 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Cxcl12P40224 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms