Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm28066-201ENSMUST00000188657 472 ntBASIC5.08□□□□□ -1.6
Cd28P31041 BC049739-201ENSMUST00000202626 660 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Gm44227-201ENSMUST00000203576 241 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.08□□□□□ -1.6
Cd28P31041 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC5.08□□□□□ -1.6
Cd28P31041 Gm18205-201ENSMUST00000209215 841 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.08□□□□□ -1.6
Cd28P31041 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.08□□□□□ -1.6
Cd28P31041 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.08□□□□□ -1.6
Cd28P31041 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.08□□□□□ -1.6
Cd28P31041 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cd28P31041 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.08□□□□□ -1.6
Cd28P31041 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cd28P31041 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Cd28P31041 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cd28P31041 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.07□□□□□ -1.6
Cd28P31041 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cd28P31041 Gm25916-201ENSMUST00000104263 131 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm15153-201ENSMUST00000119867 274 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.07□□□□□ -1.6
Cd28P31041 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.07□□□□□ -1.6
Cd28P31041 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm6223-201ENSMUST00000178436 871 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm4832-201ENSMUST00000182679 399 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm26970-201ENSMUST00000182990 964 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm3544-201ENSMUST00000196129 305 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cd28P31041 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Gm18255-201ENSMUST00000211316 765 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Gm45448-201ENSMUST00000211739 209 ntBASIC5.07□□□□□ -1.6
Cd28P31041 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.07□□□□□ -1.6
Cd28P31041 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Cd28P31041 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cd28P31041 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Cd28P31041 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.07□□□□□ -1.6
Cd28P31041 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cd28P31041 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cd28P31041 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.06□□□□□ -1.6
Cd28P31041 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.06□□□□□ -1.6
Cd28P31041 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Cd28P31041 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Gm22650-201ENSMUST00000175138 105 ntBASIC5.06□□□□□ -1.6
Cd28P31041 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Gm6489-201ENSMUST00000178167 696 ntBASIC5.06□□□□□ -1.6
Cd28P31041 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cd28P31041 Gm17048-201ENSMUST00000179266 847 ntBASIC5.06□□□□□ -1.6
Cd28P31041 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cd28P31041 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.06□□□□□ -1.6
Cd28P31041 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms