Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.34□□□□□ -1.55
P20040 Gm9836-201ENSMUST00000117132 216 ntBASIC5.34□□□□□ -1.55
P20040 Gm13702-201ENSMUST00000118542 825 ntBASIC5.34□□□□□ -1.55
P20040 Gm8855-201ENSMUST00000118888 878 ntBASIC5.34□□□□□ -1.55
P20040 Gm12307-201ENSMUST00000120581 590 ntBASIC5.34□□□□□ -1.55
P20040 Gm13121-201ENSMUST00000120637 632 ntBASIC5.34□□□□□ -1.55
P20040 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Gm24239-201ENSMUST00000157791 255 ntBASIC5.34□□□□□ -1.55
P20040 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.34□□□□□ -1.55
P20040 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
P20040 Gm37838-201ENSMUST00000194464 312 ntBASIC5.34□□□□□ -1.55
P20040 Gm8869-201ENSMUST00000195222 947 ntBASIC5.34□□□□□ -1.55
P20040 Gm43744-201ENSMUST00000196387 688 ntBASIC5.34□□□□□ -1.55
P20040 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.34□□□□□ -1.55
P20040 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.34□□□□□ -1.55
P20040 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.34□□□□□ -1.55
P20040 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.34□□□□□ -1.55
P20040 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.34□□□□□ -1.55
P20040 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.34□□□□□ -1.55
P20040 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.34□□□□□ -1.55
P20040 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.34□□□□□ -1.55
P20040 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.34□□□□□ -1.55
P20040 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.34□□□□□ -1.55
P20040 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
P20040 Gm22581-201ENSMUST00000083735 136 ntBASIC5.34□□□□□ -1.55
P20040 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.34□□□□□ -1.56
P20040 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
P20040 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
P20040 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
P20040 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
P20040 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.34□□□□□ -1.56
P20040 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.33□□□□□ -1.56
P20040 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
P20040 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.33□□□□□ -1.56
P20040 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Gm14580-201ENSMUST00000119122 718 ntBASIC5.33□□□□□ -1.56
P20040 Gm13593-201ENSMUST00000121329 692 ntBASIC5.33□□□□□ -1.56
P20040 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.33□□□□□ -1.56
P20040 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.33□□□□□ -1.56
P20040 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
P20040 Olfr331-202ENSMUST00000170501 957 ntBASIC5.33□□□□□ -1.56
P20040 Gm5947-201ENSMUST00000179156 714 ntBASIC5.33□□□□□ -1.56
P20040 Gm5645-201ENSMUST00000179597 714 ntBASIC5.33□□□□□ -1.56
P20040 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.33□□□□□ -1.56
P20040 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
P20040 Gm412-201ENSMUST00000193360 948 ntBASIC5.33□□□□□ -1.56
P20040 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
P20040 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.33□□□□□ -1.56
P20040 Gm7626-201ENSMUST00000195801 353 ntBASIC5.33□□□□□ -1.56
P20040 Gm43743-202ENSMUST00000198353 491 ntBASIC5.33□□□□□ -1.56
P20040 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.33□□□□□ -1.56
P20040 Gm43233-201ENSMUST00000200491 616 ntBASIC5.33□□□□□ -1.56
P20040 Gm36378-201ENSMUST00000201709 388 ntBASIC5.33□□□□□ -1.56
P20040 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.33□□□□□ -1.56
P20040 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.33□□□□□ -1.56
P20040 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.33□□□□□ -1.56
P20040 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.33□□□□□ -1.56
P20040 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.33□□□□□ -1.56
P20040 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.33□□□□□ -1.56
P20040 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.33□□□□□ -1.56
P20040 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.33□□□□□ -1.56
P20040 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
P20040 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
P20040 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
P20040 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
P20040 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
P20040 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.32□□□□□ -1.56
P20040 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.32□□□□□ -1.56
P20040 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.32□□□□□ -1.56
P20040 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
P20040 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
P20040 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms