Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm43637-201ENSMUST00000202206 2926 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm10062-201ENSMUST00000072180 1470 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm12057-201ENSMUST00000117244 1427 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hmgb3O54879 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm12306-201ENSMUST00000117256 171 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm14294-201ENSMUST00000119749 751 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm14741-201ENSMUST00000120777 1009 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm15316-201ENSMUST00000121082 421 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm5166-201ENSMUST00000121332 573 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm12778-201ENSMUST00000122341 333 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm8648-201ENSMUST00000122457 221 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm24186-201ENSMUST00000157983 127 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm17934-201ENSMUST00000192818 422 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm37358-201ENSMUST00000195492 479 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm3321-201ENSMUST00000200603 1129 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm43459-201ENSMUST00000202093 331 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm5318-201ENSMUST00000205249 406 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm7943-201ENSMUST00000212078 1034 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgb3O54879 CT485612.1-201ENSMUST00000222555 382 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 AC123061.2-201ENSMUST00000226234 802 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 AC106830.2-201ENSMUST00000226624 943 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgb3O54879 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgb3O54879 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Hmgb3O54879 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgb3O54879 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.8□□□□□ -1.64
Hmgb3O54879 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm13024-201ENSMUST00000121756 718 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Snora47-201ENSMUST00000157483 138 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm23222-201ENSMUST00000158117 76 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm7418-201ENSMUST00000162120 801 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm6541-201ENSMUST00000165542 561 ntBASIC4.79□□□□□ -1.64
Hmgb3O54879 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgb3O54879 Gm24103-201ENSMUST00000174930 77 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms