Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm12939-201ENSMUST00000117303 165 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm24682-201ENSMUST00000158764 137 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm22119-201ENSMUST00000175594 99 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm26557-201ENSMUST00000180756 493 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm37581-201ENSMUST00000192371 988 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm43467-201ENSMUST00000197441 437 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm42776-201ENSMUST00000198031 406 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm44163-201ENSMUST00000205140 475 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm6702-201ENSMUST00000208496 471 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm18329-201ENSMUST00000215832 589 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 AC165260.3-201ENSMUST00000225101 665 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm26442-201ENSMUST00000082588 153 ntBASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lima1Q9ERG0 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Pramel-201ENSMUST00000118979 1383 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm12439-201ENSMUST00000117162 365 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm14531-201ENSMUST00000120845 285 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm6977-201ENSMUST00000121568 512 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm15840-201ENSMUST00000122099 943 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm17934-201ENSMUST00000192818 422 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm29736-201ENSMUST00000198189 385 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm45448-201ENSMUST00000211739 209 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Gm2614-201ENSMUST00000223227 403 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lima1Q9ERG0 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms