Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Mir6361-201ENSMUST00000185079 101 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm36991-201ENSMUST00000191800 648 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm19739-201ENSMUST00000195941 153 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm43116-201ENSMUST00000199789 195 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm44837-201ENSMUST00000206863 717 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm45070-201ENSMUST00000208100 246 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm19033-201ENSMUST00000208516 964 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm22714-201ENSMUST00000116894 78 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm14173-201ENSMUST00000117690 278 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm12890-201ENSMUST00000120885 373 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm25246-201ENSMUST00000175476 69 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm25065-201ENSMUST00000177914 132 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm25891-201ENSMUST00000180050 132 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm8860-201ENSMUST00000193160 445 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm37758-201ENSMUST00000194275 629 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm43501-201ENSMUST00000202513 107 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm4548-201ENSMUST00000208487 509 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm45473-201ENSMUST00000211452 616 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm10221-201ENSMUST00000088299 309 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdc40Q9DC48 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdc40Q9DC48 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms