Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm25281-201ENSMUST00000157270 104 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Snora81-201ENSMUST00000157310 178 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm10136-201ENSMUST00000183196 435 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm27158-201ENSMUST00000183813 238 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm37439-201ENSMUST00000193150 856 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm43576-201ENSMUST00000197937 871 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm42516-201ENSMUST00000198691 767 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm2225-201ENSMUST00000209570 377 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm19181-201ENSMUST00000218891 940 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm12874-201ENSMUST00000117190 913 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm12577-201ENSMUST00000119701 574 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm5387-201ENSMUST00000119776 857 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm15750-201ENSMUST00000120970 616 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm8648-201ENSMUST00000122457 221 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm16563-201ENSMUST00000162673 423 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm23632-201ENSMUST00000175289 125 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm29474-201ENSMUST00000187688 379 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm20954-201ENSMUST00000189078 644 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm28396-201ENSMUST00000190309 379 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm38068-201ENSMUST00000192546 540 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm7019-201ENSMUST00000194122 369 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm44332-201ENSMUST00000203712 433 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm18387-201ENSMUST00000220333 702 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm22444-201ENSMUST00000093693 108 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.81□□□□□ -1.32
Ddx56Q9D0R4 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms