Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Smc1aQ9CU62 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm25795-201ENSMUST00000104421 132 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm10936-201ENSMUST00000105264 252 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm15781-201ENSMUST00000120216 323 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm14695-201ENSMUST00000121721 282 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm11545-201ENSMUST00000146507 375 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Mir7211-201ENSMUST00000184071 63 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm20926-201ENSMUST00000194457 696 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm6070-201ENSMUST00000207275 419 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.85□□□□□ -1.31
Smc1aQ9CU62 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm23739-201ENSMUST00000102295 108 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm11617-201ENSMUST00000119609 639 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm7189-201ENSMUST00000119811 429 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm15194-201ENSMUST00000120453 434 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm11925-201ENSMUST00000121375 535 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm25487-201ENSMUST00000158725 125 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm3242-201ENSMUST00000171273 485 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm22548-201ENSMUST00000174899 78 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm27030-201ENSMUST00000182551 464 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Mir7235-201ENSMUST00000183796 56 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm36939-201ENSMUST00000194889 439 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm3544-201ENSMUST00000196129 305 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm8454-201ENSMUST00000196980 811 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm45156-201ENSMUST00000207255 439 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms