Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43383-201ENSMUST00000195981 469 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm19134-201ENSMUST00000221203 487 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm6575-201ENSMUST00000222946 697 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC164297.5-201ENSMUST00000224365 198 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.19□□□□□ -1.42
Clrn1Q8K445 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clrn1Q8K445 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm24888-201ENSMUST00000104387 130 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm16073-201ENSMUST00000116032 517 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm14513-201ENSMUST00000117403 123 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm11504-201ENSMUST00000120211 173 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm14038-201ENSMUST00000121500 807 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm5809-201ENSMUST00000121854 529 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm22895-201ENSMUST00000157508 308 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm9064-201ENSMUST00000163579 566 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm27044-201ENSMUST00000183033 796 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Mir6348-201ENSMUST00000183804 120 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm28149-201ENSMUST00000187102 378 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm28768-201ENSMUST00000189034 378 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm36638-201ENSMUST00000193295 400 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm43655-201ENSMUST00000197367 222 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm42625-201ENSMUST00000198611 922 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm44227-201ENSMUST00000203576 241 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm44972-201ENSMUST00000206419 406 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm18855-201ENSMUST00000206689 570 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm17850-201ENSMUST00000210023 1154 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.18□□□□□ -1.42
Clrn1Q8K445 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clrn1Q8K445 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms