Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm12788-201ENSMUST00000119090 308 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm15103-201ENSMUST00000119893 871 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm15618-201ENSMUST00000121610 452 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm24685-201ENSMUST00000157764 285 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm4831-201ENSMUST00000174626 594 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm8183-201ENSMUST00000183134 980 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm37177-201ENSMUST00000193768 417 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Trbv9-201ENSMUST00000194494 290 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm9292-201ENSMUST00000222008 710 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm8256-203ENSMUST00000228692 591 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm5321-201ENSMUST00000072050 447 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm24041-201ENSMUST00000083115 156 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm26984-201ENSMUST00000182345 3510 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm25295-201ENSMUST00000122794 306 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm2602-201ENSMUST00000202112 571 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm19596-201ENSMUST00000203685 739 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm19182-201ENSMUST00000207139 577 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm6070-201ENSMUST00000207275 419 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm6009-201ENSMUST00000210848 280 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm5832-201ENSMUST00000121704 1582 ntBASIC7.36□□□□□ -1.23
Brf1Q8CFK2 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.36□□□□□ -1.23
Brf1Q8CFK2 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Brf1Q8CFK2 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms