Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm7626-201ENSMUST00000195801 353 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm44312-201ENSMUST00000203536 469 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm44239-201ENSMUST00000204228 271 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm14667-201ENSMUST00000119448 1350 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm25917-201ENSMUST00000104267 130 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm23440-201ENSMUST00000104299 130 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm4853-201ENSMUST00000119359 394 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm4234-201ENSMUST00000119747 714 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm7931-201ENSMUST00000121537 271 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm23958-201ENSMUST00000157207 105 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm3242-201ENSMUST00000171273 485 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Mir7220-201ENSMUST00000183978 60 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm8869-201ENSMUST00000195222 947 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm43390-201ENSMUST00000196614 421 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm7832-201ENSMUST00000202613 880 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm31861-201ENSMUST00000204563 672 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm44837-201ENSMUST00000206863 717 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm45548-201ENSMUST00000210076 3167 ntBASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup88Q8CEC0 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm43981-201ENSMUST00000203285 1467 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm15781-201ENSMUST00000120216 323 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm7700-201ENSMUST00000120273 970 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm24733-201ENSMUST00000158863 253 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm28934-201ENSMUST00000186491 346 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm37838-201ENSMUST00000194464 312 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm36378-201ENSMUST00000201709 388 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm3800-201ENSMUST00000221086 554 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup88Q8CEC0 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms