Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm24561-201ENSMUST00000175182 95 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm18415-201ENSMUST00000177464 647 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm28846-201ENSMUST00000189161 368 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Trbv28-201ENSMUST00000192804 264 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm33571-201ENSMUST00000193271 657 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Platr25-208ENSMUST00000222602 939 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Mir425-201ENSMUST00000083645 85 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc87Q8CDL9 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm12939-201ENSMUST00000117303 165 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm16016-201ENSMUST00000120831 550 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm13642-201ENSMUST00000121697 381 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm23071-201ENSMUST00000158242 115 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm24359-201ENSMUST00000158418 221 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm5456-201ENSMUST00000170706 844 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm18833-201ENSMUST00000173218 862 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm17045-201ENSMUST00000178600 844 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm18698-201ENSMUST00000192327 668 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm37380-201ENSMUST00000193752 397 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm7452-201ENSMUST00000200764 788 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm43772-201ENSMUST00000202052 379 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm18601-201ENSMUST00000220831 634 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm4822-201ENSMUST00000077551 479 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm25810-201ENSMUST00000082752 108 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc87Q8CDL9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Mir674-201ENSMUST00000102421 100 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm22543-201ENSMUST00000104347 94 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm9432-201ENSMUST00000117810 759 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm7212-201ENSMUST00000120817 348 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm12504-202ENSMUST00000148026 306 ntBASIC6.72□□□□□ -1.33
Ccdc87Q8CDL9 Gm23954-201ENSMUST00000157213 353 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms