Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm43762-201ENSMUST00000201521 295 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm44487-201ENSMUST00000205145 325 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm7808-201ENSMUST00000082002 387 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lrif1Q8CDD9 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm23311-201ENSMUST00000104152 134 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm15016-201ENSMUST00000117300 720 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm14375-201ENSMUST00000119490 855 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm12140-201ENSMUST00000121214 544 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm5125-201ENSMUST00000148614 624 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm23903-201ENSMUST00000157566 131 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm17511-201ENSMUST00000172206 342 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Mir6921-201ENSMUST00000183719 80 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm27348-201ENSMUST00000184511 170 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm42776-201ENSMUST00000198031 406 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm18600-201ENSMUST00000207205 505 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm5055-201ENSMUST00000215697 581 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm18789-201ENSMUST00000216115 550 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.93□□□□□ -1.46
Lrif1Q8CDD9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms