Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm23624-201ENSMUST00000082463 321 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm25345-201ENSMUST00000104505 133 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm12099-201ENSMUST00000118660 750 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm14970-201ENSMUST00000122289 355 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm26346-201ENSMUST00000157525 329 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm24179-201ENSMUST00000158925 127 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm27512-201ENSMUST00000175328 126 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm20620-201ENSMUST00000177528 168 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm17048-201ENSMUST00000179266 847 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm5990-201ENSMUST00000203126 746 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm24454-201ENSMUST00000083349 132 ntBASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trub1Q8C0D0 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm23311-201ENSMUST00000104152 134 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm7146-201ENSMUST00000116079 739 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm13835-201ENSMUST00000118459 685 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm9005-201ENSMUST00000119908 607 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm12140-201ENSMUST00000121214 544 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm15300-201ENSMUST00000122324 279 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm15257-201ENSMUST00000177680 883 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm15252-201ENSMUST00000177750 883 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm15256-201ENSMUST00000177793 883 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm15260-201ENSMUST00000179402 883 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm29519-201ENSMUST00000186994 398 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm18444-201ENSMUST00000191239 629 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm3351-201ENSMUST00000193454 505 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm19033-201ENSMUST00000208516 964 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Gm18601-201ENSMUST00000220831 634 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trub1Q8C0D0 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms