Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 AC165092.4-201ENSMUST00000225025 679 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 AC144733.2-201ENSMUST00000222552 2292 ntBASIC8.42□□□□□ -1.06
Usp47Q8BY87 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp47Q8BY87 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 AC159244.3-201ENSMUST00000222887 3153 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm8424-201ENSMUST00000117716 988 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm12654-201ENSMUST00000120387 587 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm5027-201ENSMUST00000206700 375 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 CT030170.4-202ENSMUST00000221109 540 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm6125-201ENSMUST00000217983 3472 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp47Q8BY87 Cmah-208ENSMUST00000224819 9482 ntBASIC8.41□□□□□ -1.06
Usp47Q8BY87 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm45562-201ENSMUST00000210015 1537 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm15331-201ENSMUST00000120225 385 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm8323-201ENSMUST00000168436 1201 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm2871-201ENSMUST00000179984 1204 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Mir6906-201ENSMUST00000198998 58 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm7832-201ENSMUST00000202613 880 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm45026-201ENSMUST00000205292 833 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm15500-201ENSMUST00000071523 894 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Fam26d-202ENSMUST00000218239 3075 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp47Q8BY87 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.4□□□□□ -1.06
Usp47Q8BY87 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Usp47Q8BY87 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Usp47Q8BY87 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC8.4□□□□□ -1.07
Usp47Q8BY87 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Usp47Q8BY87 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Usp47Q8BY87 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm24886-201ENSMUST00000104384 123 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm11987-201ENSMUST00000118524 381 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Mup-ps28-201ENSMUST00000120686 289 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm37375-201ENSMUST00000193859 387 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm37385-201ENSMUST00000195223 387 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm43798-201ENSMUST00000202056 394 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm6702-201ENSMUST00000208496 471 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Gm18409-202ENSMUST00000220105 529 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.39□□□□□ -1.07
Usp47Q8BY87 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Usp47Q8BY87 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp47Q8BY87 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms