Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm11484-201ENSMUST00000119808 338 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm22342-201ENSMUST00000122647 298 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm17149-201ENSMUST00000164712 375 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Mir5112-201ENSMUST00000174897 60 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm24824-201ENSMUST00000175097 78 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm25525-201ENSMUST00000177701 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm26178-201ENSMUST00000177706 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm26465-201ENSMUST00000178517 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm24317-201ENSMUST00000178536 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm25021-201ENSMUST00000179184 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm22995-201ENSMUST00000179670 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm24424-201ENSMUST00000179714 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm24389-201ENSMUST00000179962 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm25672-201ENSMUST00000180111 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm27507-201ENSMUST00000184199 93 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Mir6241-201ENSMUST00000184225 103 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm27636-201ENSMUST00000184528 122 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm29163-201ENSMUST00000188029 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm7341-201ENSMUST00000192183 926 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm37177-201ENSMUST00000193768 417 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm44604-201ENSMUST00000205475 496 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm45446-201ENSMUST00000209348 216 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm19217-201ENSMUST00000218238 328 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm18704-201ENSMUST00000219736 446 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm2754-201ENSMUST00000223383 589 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 AC107453.2-201ENSMUST00000227714 655 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm23815-201ENSMUST00000083231 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm23520-201ENSMUST00000093736 107 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Prpf38bQ80SY5 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Gm25311-201ENSMUST00000104136 132 ntBASIC7.5□□□□□ -1.21
Prpf38bQ80SY5 Gm23768-201ENSMUST00000104440 131 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms