Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm37857-201ENSMUST00000191784 1199 ntBASIC6□□□□□ -1.45
ClpbQ60649 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6□□□□□ -1.45
ClpbQ60649 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ClpbQ60649 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6□□□□□ -1.45
ClpbQ60649 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6□□□□□ -1.45
ClpbQ60649 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ClpbQ60649 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6□□□□□ -1.45
ClpbQ60649 Gm2996-201ENSMUST00000211398 537 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm45448-201ENSMUST00000211739 209 ntBASIC6□□□□□ -1.45
ClpbQ60649 AC147782.1-201ENSMUST00000219169 475 ntBASIC6□□□□□ -1.45
ClpbQ60649 AC211878.6-201ENSMUST00000221896 358 ntBASIC6□□□□□ -1.45
ClpbQ60649 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 AC139294.2-201ENSMUST00000227159 285 ntBASIC6□□□□□ -1.45
ClpbQ60649 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Gm36947-201ENSMUST00000194709 2249 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm19210-201ENSMUST00000199562 1350 ntBASIC6□□□□□ -1.45
ClpbQ60649 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Gm38377-201ENSMUST00000193253 3772 ntBASIC6□□□□□ -1.45
ClpbQ60649 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm42455-201ENSMUST00000199761 2736 ntBASIC6□□□□□ -1.45
ClpbQ60649 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6□□□□□ -1.45
ClpbQ60649 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6□□□□□ -1.45
ClpbQ60649 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm37248-201ENSMUST00000193576 3174 ntBASIC6□□□□□ -1.45
ClpbQ60649 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm26289-201ENSMUST00000104169 131 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm13338-201ENSMUST00000120235 361 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm12222-201ENSMUST00000121368 260 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm23894-201ENSMUST00000158107 313 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm22548-201ENSMUST00000174899 78 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm27348-201ENSMUST00000184511 170 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm18350-201ENSMUST00000187395 955 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.99□□□□□ -1.45
ClpbQ60649 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm44243-201ENSMUST00000204323 692 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm20074-201ENSMUST00000208144 484 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.99□□□□□ -1.45
ClpbQ60649 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ClpbQ60649 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
ClpbQ60649 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ClpbQ60649 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Gm15732-201ENSMUST00000079794 480 ntBASIC5.99□□□□□ -1.45
ClpbQ60649 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ClpbQ60649 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ClpbQ60649 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
ClpbQ60649 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms