Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14580-201ENSMUST00000119122 718 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm13578-201ENSMUST00000120849 590 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm11879-201ENSMUST00000121885 702 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm24081-201ENSMUST00000175177 125 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm5947-201ENSMUST00000179156 714 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm5645-201ENSMUST00000179597 714 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm18700-201ENSMUST00000185791 553 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm45628-201ENSMUST00000210849 274 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm8863-201ENSMUST00000216630 926 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trafd1Q3UDK1 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Snora35-201ENSMUST00000104579 128 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm8501-201ENSMUST00000117684 432 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm13835-201ENSMUST00000118459 685 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm13702-201ENSMUST00000118542 825 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Mir1960-201ENSMUST00000157488 78 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm23896-201ENSMUST00000158109 130 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Mir7072-201ENSMUST00000184542 60 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm43850-201ENSMUST00000202021 578 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm45448-201ENSMUST00000211739 209 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm8412-201ENSMUST00000077493 440 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.98□□□□□ -1.45
Trafd1Q3UDK1 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm12099-201ENSMUST00000118660 750 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm12308-201ENSMUST00000120440 389 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm15300-201ENSMUST00000122324 279 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm24687-201ENSMUST00000157758 241 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm23631-201ENSMUST00000175291 123 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Gm27653-201ENSMUST00000185037 136 ntBASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Trafd1Q3UDK1 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms