Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm44565-201ENSMUST00000208194 269 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm7769-201ENSMUST00000212900 933 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col8a1Q00780 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 AC107763.1-202ENSMUST00000225021 2663 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.92□□□□□ -1.46
Col8a1Q00780 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col8a1Q00780 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC5.92□□□□□ -1.46
Col8a1Q00780 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm15785-201ENSMUST00000119145 694 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm13489-201ENSMUST00000121234 971 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm8080-201ENSMUST00000122046 1155 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm5401-201ENSMUST00000122444 365 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm4725-201ENSMUST00000151048 587 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm26393-201ENSMUST00000157625 129 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm26323-201ENSMUST00000157743 175 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm8676-201ENSMUST00000184206 637 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm27601-201ENSMUST00000184794 127 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Mir6403-201ENSMUST00000185007 129 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm28958-201ENSMUST00000185864 703 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm29143-201ENSMUST00000189462 201 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm36939-201ENSMUST00000194889 439 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm6366-201ENSMUST00000198766 826 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm7285-201ENSMUST00000198801 580 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm43580-201ENSMUST00000202892 284 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm44566-201ENSMUST00000207638 304 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col8a1Q00780 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm17997-201ENSMUST00000211801 840 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm7639-201ENSMUST00000212608 484 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm6906-201ENSMUST00000218014 569 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm36758-201ENSMUST00000222594 310 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm23456-201ENSMUST00000083335 137 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.91□□□□□ -1.46
Col8a1Q00780 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms