Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm24692-201ENSMUST00000157761 146 ntBASIC3.98□□□□□ -1.77
PrkdcP97313 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC3.98□□□□□ -1.77
PrkdcP97313 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC3.98□□□□□ -1.77
PrkdcP97313 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC3.98□□□□□ -1.77
PrkdcP97313 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
PrkdcP97313 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC3.98□□□□□ -1.77
PrkdcP97313 Gm19169-201ENSMUST00000220109 1246 ntBASIC3.98□□□□□ -1.77
PrkdcP97313 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PrkdcP97313 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PrkdcP97313 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm7181-201ENSMUST00000202197 434 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Gm44757-201ENSMUST00000206373 157 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Mir193a-201ENSMUST00000083461 66 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 AC126549.1-201ENSMUST00000225044 3687 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm29293-201ENSMUST00000189416 2188 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm6786-201ENSMUST00000203165 1915 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 LOC102637012-201ENSMUST00000217248 2562 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm37894-201ENSMUST00000195416 2599 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Gm37174-201ENSMUST00000194699 3058 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC3.97□□□□□ -1.77
PrkdcP97313 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 CT954323.2-201ENSMUST00000222056 213 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PrkdcP97313 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 AC158537.1-201ENSMUST00000224637 1711 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PrkdcP97313 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC3.97□□□□□ -1.77
PrkdcP97313 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PrkdcP97313 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm14125-202ENSMUST00000120921 756 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm33952-201ENSMUST00000197795 408 ntBASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC3.97□□□□□ -1.77
PrkdcP97313 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC3.97□□□□□ -1.77
PrkdcP97313 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PrkdcP97313 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PrkdcP97313 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
PrkdcP97313 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms