Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm15257-201ENSMUST00000177680 883 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm15252-201ENSMUST00000177750 883 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm15256-201ENSMUST00000177793 883 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm15260-201ENSMUST00000179402 883 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm28527-201ENSMUST00000185210 297 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm19087-201ENSMUST00000191430 946 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm5886-202ENSMUST00000203957 522 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Gm17994-201ENSMUST00000209260 533 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.38□□□□□ -1.55
H3f3aP84244 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.38□□□□□ -1.55
H3f3aP84244 AV026068-216ENSMUST00000223874 328 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3f3aP84244 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3f3aP84244 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3f3aP84244 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm6990-201ENSMUST00000086830 348 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.38□□□□□ -1.55
H3f3aP84244 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
H3f3aP84244 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3f3aP84244 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.37□□□□□ -1.55
H3f3aP84244 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm25013-201ENSMUST00000158402 128 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm17366-201ENSMUST00000167629 187 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.37□□□□□ -1.55
H3f3aP84244 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm36378-201ENSMUST00000201709 388 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm45724-201ENSMUST00000213031 420 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm22684-201ENSMUST00000082849 132 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm24454-201ENSMUST00000083349 132 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
H3f3aP84244 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3f3aP84244 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.37□□□□□ -1.55
H3f3aP84244 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3f3aP84244 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms