Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Brca1P48754 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Brca1P48754 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Brca1P48754 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Brca1P48754 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.79□□□□□ -1.32
Brca1P48754 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Brca1P48754 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Brca1P48754 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm12308-201ENSMUST00000120440 389 ntBASIC6.78□□□□□ -1.32
Brca1P48754 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm28976-201ENSMUST00000188070 144 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm28066-201ENSMUST00000188657 472 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm43779-201ENSMUST00000196691 829 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm17775-201ENSMUST00000198542 258 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm4548-201ENSMUST00000208487 509 ntBASIC6.78□□□□□ -1.32
Brca1P48754 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.78□□□□□ -1.32
Brca1P48754 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Brca1P48754 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm11774-201ENSMUST00000118601 293 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm12293-201ENSMUST00000121898 590 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm26106-201ENSMUST00000157254 228 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm29111-201ENSMUST00000188823 696 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm28584-201ENSMUST00000191489 696 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm38138-201ENSMUST00000193274 696 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm37991-201ENSMUST00000194297 696 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.78□□□□□ -1.32
Brca1P48754 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.78□□□□□ -1.32
Brca1P48754 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Brca1P48754 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Brca1P48754 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.77□□□□□ -1.32
Brca1P48754 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Brca1P48754 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Brca1P48754 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Brca1P48754 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Brca1P48754 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Brca1P48754 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Gm11990-201ENSMUST00000121505 897 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.77□□□□□ -1.33
Brca1P48754 Mir8097-201ENSMUST00000185150 119 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Gm37631-201ENSMUST00000192275 364 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Gm45032-201ENSMUST00000205375 520 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.77□□□□□ -1.33
Brca1P48754 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.77□□□□□ -1.33
Brca1P48754 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Brca1P48754 Gm8412-201ENSMUST00000077493 440 ntBASIC6.77□□□□□ -1.33
Brca1P48754 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Brca1P48754 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms