Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rfx1P48377 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rfx1P48377 Snora9-201ENSMUST00000082579 133 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm10794-201ENSMUST00000099624 207 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Rfx1P48377 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Rfx1P48377 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Rfx1P48377 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC8□□□□□ -1.13
Rfx1P48377 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Rfx1P48377 Gm43059-201ENSMUST00000202437 1388 ntBASIC8□□□□□ -1.13
Rfx1P48377 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8□□□□□ -1.13
Rfx1P48377 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Rfx1P48377 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rfx1P48377 Gm6490-201ENSMUST00000111862 461 ntBASIC8□□□□□ -1.13
Rfx1P48377 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Rfx1P48377 Gm13400-201ENSMUST00000117436 380 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm13607-201ENSMUST00000117875 539 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm13222-201ENSMUST00000119638 138 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm13788-201ENSMUST00000120767 601 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm11896-201ENSMUST00000121105 820 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm11383-201ENSMUST00000121346 807 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm15885-201ENSMUST00000122114 388 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm15187-201ENSMUST00000122329 264 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm26023-201ENSMUST00000122722 313 ntBASIC8□□□□□ -1.13
Rfx1P48377 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Gm8245-201ENSMUST00000182434 987 ntBASIC8□□□□□ -1.13
Rfx1P48377 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Rfx1P48377 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Gm44952-201ENSMUST00000204443 433 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm2774-201ENSMUST00000213650 1165 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm18655-201ENSMUST00000214802 1090 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC8□□□□□ -1.13
Rfx1P48377 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC8□□□□□ -1.13
Rfx1P48377 AC154487.1-201ENSMUST00000224649 226 ntBASIC8□□□□□ -1.13
Rfx1P48377 CT009733.1-201ENSMUST00000225322 425 ntBASIC8□□□□□ -1.13
Rfx1P48377 AC154380.1-201ENSMUST00000226804 720 ntBASIC8□□□□□ -1.13
Rfx1P48377 AC168062.1-201ENSMUST00000228048 769 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC8□□□□□ -1.13
Rfx1P48377 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rfx1P48377 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Rfx1P48377 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rfx1P48377 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rfx1P48377 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Rfx1P48377 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rfx1P48377 Gm38178-201ENSMUST00000194502 2471 ntBASIC8□□□□□ -1.13
Rfx1P48377 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.99□□□□□ -1.13
Rfx1P48377 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Rfx1P48377 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rfx1P48377 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms