Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Gm12936-201ENSMUST00000121439 301 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Gm23224-201ENSMUST00000158122 271 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Cdx2P43241 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdx2P43241 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.81□□□□□ -1.48
Cdx2P43241 Mir219c-201ENSMUST00000199860 60 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Gm4374-201ENSMUST00000204929 424 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdx2P43241 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdx2P43241 Gm6068-201ENSMUST00000222270 387 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdx2P43241 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.81□□□□□ -1.48
Cdx2P43241 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdx2P43241 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx2P43241 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdx2P43241 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cdx2P43241 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Cdx2P43241 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm22592-201ENSMUST00000104242 131 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm13811-201ENSMUST00000117800 256 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm14836-201ENSMUST00000118567 471 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm14842-201ENSMUST00000119577 269 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm13533-201ENSMUST00000121104 177 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm22276-201ENSMUST00000122469 129 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.8□□□□□ -1.48
Cdx2P43241 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm24405-201ENSMUST00000083033 167 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdx2P43241 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx2P43241 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Cdx2P43241 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.8□□□□□ -1.48
Cdx2P43241 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx2P43241 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdx2P43241 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx2P43241 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx2P43241 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
Cdx2P43241 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Cdx2P43241 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx2P43241 Gm24886-201ENSMUST00000104384 123 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.79□□□□□ -1.48
Cdx2P43241 Gm15335-201ENSMUST00000122442 411 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx2P43241 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.79□□□□□ -1.48
Cdx2P43241 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx2P43241 Gm26106-201ENSMUST00000157254 228 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm22867-201ENSMUST00000157499 109 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm26489-201ENSMUST00000157880 264 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm20397-201ENSMUST00000174520 362 ntBASIC5.79□□□□□ -1.48
Cdx2P43241 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms