Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm13455-201ENSMUST00000118767 517 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm9005-201ENSMUST00000119908 607 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm15786-201ENSMUST00000121079 450 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm13808-201ENSMUST00000121353 184 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm4660-201ENSMUST00000131499 403 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm25387-201ENSMUST00000157813 132 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm26037-201ENSMUST00000158150 311 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm23343-201ENSMUST00000158964 143 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm17137-202ENSMUST00000165729 957 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm23632-201ENSMUST00000175289 125 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm17048-201ENSMUST00000179266 847 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm29509-201ENSMUST00000185716 321 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm29815-201ENSMUST00000202418 178 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm18103-201ENSMUST00000216621 779 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxc11P31313 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxc11P31313 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Mir466i-201ENSMUST00000116924 121 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm13835-201ENSMUST00000118459 685 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm12565-201ENSMUST00000119004 649 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm8582-201ENSMUST00000164061 789 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm20620-201ENSMUST00000177528 168 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm9274-201ENSMUST00000182505 984 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm27653-201ENSMUST00000185037 136 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm43354-201ENSMUST00000196862 346 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm44571-201ENSMUST00000208092 533 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm19212-201ENSMUST00000216642 862 ntBASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxc11P31313 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxc11P31313 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxc11P31313 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms