Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
P20040 Gm12442-201ENSMUST00000118372 338 ntBASIC5.36□□□□□ -1.55
P20040 Gm13690-201ENSMUST00000118989 285 ntBASIC5.36□□□□□ -1.55
P20040 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.36□□□□□ -1.55
P20040 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
P20040 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.36□□□□□ -1.55
P20040 Gm12262-201ENSMUST00000119915 305 ntBASIC5.36□□□□□ -1.55
P20040 Gm14054-201ENSMUST00000120744 704 ntBASIC5.36□□□□□ -1.55
P20040 Gm11879-201ENSMUST00000121885 702 ntBASIC5.36□□□□□ -1.55
P20040 Gm23903-201ENSMUST00000157566 131 ntBASIC5.36□□□□□ -1.55
P20040 Mir5107-201ENSMUST00000175586 88 ntBASIC5.36□□□□□ -1.55
P20040 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.36□□□□□ -1.55
P20040 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.36□□□□□ -1.55
P20040 Mir7046-201ENSMUST00000183435 66 ntBASIC5.36□□□□□ -1.55
P20040 Gm27998-201ENSMUST00000184902 361 ntBASIC5.36□□□□□ -1.55
P20040 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.36□□□□□ -1.55
P20040 Gm19087-201ENSMUST00000191430 946 ntBASIC5.36□□□□□ -1.55
P20040 Gm37809-201ENSMUST00000195050 931 ntBASIC5.36□□□□□ -1.55
P20040 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.36□□□□□ -1.55
P20040 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.36□□□□□ -1.55
P20040 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.36□□□□□ -1.55
P20040 Gm19212-201ENSMUST00000216642 862 ntBASIC5.36□□□□□ -1.55
P20040 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.36□□□□□ -1.55
P20040 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.36□□□□□ -1.55
P20040 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.36□□□□□ -1.55
P20040 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
P20040 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
P20040 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
P20040 Gm22684-201ENSMUST00000082849 132 ntBASIC5.36□□□□□ -1.55
P20040 Mir3068-201ENSMUST00000083004 136 ntBASIC5.36□□□□□ -1.55
P20040 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
P20040 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.36□□□□□ -1.55
P20040 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.36□□□□□ -1.55
P20040 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
P20040 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.36□□□□□ -1.55
P20040 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
P20040 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.35□□□□□ -1.55
P20040 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
P20040 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
P20040 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
P20040 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.35□□□□□ -1.55
P20040 Gm23311-201ENSMUST00000104152 134 ntBASIC5.35□□□□□ -1.55
P20040 Gm25415-201ENSMUST00000104220 132 ntBASIC5.35□□□□□ -1.55
P20040 Gm13626-201ENSMUST00000119435 402 ntBASIC5.35□□□□□ -1.55
P20040 Gm12813-201ENSMUST00000119615 902 ntBASIC5.35□□□□□ -1.55
P20040 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.35□□□□□ -1.55
P20040 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.35□□□□□ -1.55
P20040 Gm25219-201ENSMUST00000157545 330 ntBASIC5.35□□□□□ -1.55
P20040 Gm17511-201ENSMUST00000172206 342 ntBASIC5.35□□□□□ -1.55
P20040 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.35□□□□□ -1.55
P20040 Gm3544-201ENSMUST00000196129 305 ntBASIC5.35□□□□□ -1.55
P20040 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.35□□□□□ -1.55
P20040 BC049739-201ENSMUST00000202626 660 ntBASIC5.35□□□□□ -1.55
P20040 Gm45008-201ENSMUST00000206420 493 ntBASIC5.35□□□□□ -1.55
P20040 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.35□□□□□ -1.55
P20040 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.35□□□□□ -1.55
P20040 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
P20040 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.35□□□□□ -1.55
P20040 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
P20040 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.35□□□□□ -1.55
P20040 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
P20040 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
P20040 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.35□□□□□ -1.55
P20040 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.34□□□□□ -1.55
P20040 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.34□□□□□ -1.55
P20040 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.34□□□□□ -1.55
P20040 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
P20040 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.34□□□□□ -1.55
P20040 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.34□□□□□ -1.55
P20040 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
P20040 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.34□□□□□ -1.55
P20040 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.34□□□□□ -1.55
P20040 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
P20040 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.34□□□□□ -1.55
P20040 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
P20040 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
P20040 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms