Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Lire1P11260 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm22267-201ENSMUST00000104008 131 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm25785-201ENSMUST00000104129 125 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm14893-201ENSMUST00000117904 282 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm13532-201ENSMUST00000120373 240 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm22428-201ENSMUST00000158554 132 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm17711-201ENSMUST00000172028 237 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28739-201ENSMUST00000185415 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28219-201ENSMUST00000185452 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28542-201ENSMUST00000185545 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28303-201ENSMUST00000185642 747 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29244-201ENSMUST00000185825 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29437-201ENSMUST00000185865 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29412-201ENSMUST00000185869 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28910-201ENSMUST00000185921 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28812-201ENSMUST00000185963 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29468-201ENSMUST00000185978 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm28335-201ENSMUST00000186204 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28854-201ENSMUST00000186218 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28636-201ENSMUST00000186353 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28452-201ENSMUST00000186623 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29298-201ENSMUST00000186704 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28185-201ENSMUST00000186815 694 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28227-201ENSMUST00000186862 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28796-201ENSMUST00000186905 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29659-201ENSMUST00000187063 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28473-201ENSMUST00000187325 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28558-201ENSMUST00000187373 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28682-201ENSMUST00000187430 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28738-201ENSMUST00000187480 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28949-201ENSMUST00000187805 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28773-201ENSMUST00000187925 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29319-201ENSMUST00000188060 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29422-201ENSMUST00000188062 694 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28734-201ENSMUST00000188104 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29148-201ENSMUST00000188140 336 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28787-201ENSMUST00000188357 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29312-201ENSMUST00000188724 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm29451-201ENSMUST00000188862 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29637-201ENSMUST00000188877 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29033-201ENSMUST00000189114 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29614-201ENSMUST00000189263 694 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28751-201ENSMUST00000189287 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29559-201ENSMUST00000189412 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28272-201ENSMUST00000189512 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28483-201ENSMUST00000189519 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28123-201ENSMUST00000189725 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28368-201ENSMUST00000189804 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29119-201ENSMUST00000189973 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28716-201ENSMUST00000190217 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29239-201ENSMUST00000190304 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28837-201ENSMUST00000190397 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28968-201ENSMUST00000190413 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28531-201ENSMUST00000190529 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm28165-201ENSMUST00000190669 694 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm29181-201ENSMUST00000191288 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm38229-201ENSMUST00000191931 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm32347-201ENSMUST00000192944 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm38121-201ENSMUST00000193213 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm38035-201ENSMUST00000194427 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm38350-201ENSMUST00000194789 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm37990-201ENSMUST00000195821 696 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm19185-201ENSMUST00000196365 643 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Gm18012-201ENSMUST00000204558 773 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Lire1P11260 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm45626-201ENSMUST00000210093 361 ntBASIC6.1□□□□□ -1.43
Lire1P11260 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm4012-201ENSMUST00000221504 581 ntBASIC6.1□□□□□ -1.43
Lire1P11260 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm23927-201ENSMUST00000082466 215 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.1□□□□□ -1.43
Lire1P11260 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms