Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm22370-201ENSMUST00000102422 83 ntBASIC6.38□□□□□ -1.39
TnfP06804 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.38□□□□□ -1.39
TnfP06804 Gm15194-201ENSMUST00000120453 434 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm15801-201ENSMUST00000120920 522 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm23539-201ENSMUST00000157537 224 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm22724-201ENSMUST00000158091 127 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm22636-201ENSMUST00000158142 275 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm25445-201ENSMUST00000158996 299 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm8783-201ENSMUST00000159764 522 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm15970-201ENSMUST00000160623 834 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.38□□□□□ -1.39
TnfP06804 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TnfP06804 Gm24303-201ENSMUST00000178237 126 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.38□□□□□ -1.39
TnfP06804 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TnfP06804 Gm43222-201ENSMUST00000199013 603 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm7890-201ENSMUST00000204877 601 ntBASIC6.38□□□□□ -1.39
TnfP06804 Gm19900-201ENSMUST00000207285 576 ntBASIC6.38□□□□□ -1.39
TnfP06804 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.38□□□□□ -1.39
TnfP06804 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.38□□□□□ -1.39
TnfP06804 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.38□□□□□ -1.39
TnfP06804 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
TnfP06804 Gm5582-201ENSMUST00000075251 522 ntBASIC6.38□□□□□ -1.39
TnfP06804 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TnfP06804 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TnfP06804 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.38□□□□□ -1.39
TnfP06804 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TnfP06804 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.38□□□□□ -1.39
TnfP06804 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.38□□□□□ -1.39
TnfP06804 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TnfP06804 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
TnfP06804 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.37□□□□□ -1.39
TnfP06804 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm13338-201ENSMUST00000120235 361 ntBASIC6.37□□□□□ -1.39
TnfP06804 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.37□□□□□ -1.39
TnfP06804 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm23954-201ENSMUST00000157213 353 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm23662-201ENSMUST00000158046 111 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm25439-201ENSMUST00000158280 131 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm26169-201ENSMUST00000158420 135 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm24767-201ENSMUST00000158509 95 ntBASIC6.37□□□□□ -1.39
TnfP06804 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Gm7745-201ENSMUST00000182235 973 ntBASIC6.37□□□□□ -1.39
TnfP06804 Vis1-201ENSMUST00000183957 201 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Gm28064-201ENSMUST00000185639 858 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.37□□□□□ -1.39
TnfP06804 Gm18444-201ENSMUST00000191239 629 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.37□□□□□ -1.39
TnfP06804 Gm37358-201ENSMUST00000195492 479 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm5886-202ENSMUST00000203957 522 ntBASIC6.37□□□□□ -1.39
TnfP06804 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.37□□□□□ -1.39
TnfP06804 Gm45750-201ENSMUST00000211966 354 ntBASIC6.37□□□□□ -1.39
TnfP06804 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.37□□□□□ -1.39
TnfP06804 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TnfP06804 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TnfP06804 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.37□□□□□ -1.39
TnfP06804 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.37□□□□□ -1.39
TnfP06804 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.37□□□□□ -1.39
TnfP06804 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.37□□□□□ -1.39
TnfP06804 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TnfP06804 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TnfP06804 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TnfP06804 Robo2-210ENSMUST00000226478 8059 ntBASIC6.36□□□□□ -1.39
TnfP06804 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.36□□□□□ -1.39
TnfP06804 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TnfP06804 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.36□□□□□ -1.39
TnfP06804 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 402.5 ms