Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Gm38328-201ENSMUST00000195582 317 ntBASIC6.04□□□□□ -1.44
CopeO89079 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.04□□□□□ -1.44
CopeO89079 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.04□□□□□ -1.44
CopeO89079 Gm46311-201ENSMUST00000217971 203 ntBASIC6.04□□□□□ -1.44
CopeO89079 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.04□□□□□ -1.44
CopeO89079 Gm19186-201ENSMUST00000219922 333 ntBASIC6.04□□□□□ -1.44
CopeO89079 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.04□□□□□ -1.44
CopeO89079 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.04□□□□□ -1.44
CopeO89079 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.04□□□□□ -1.44
CopeO89079 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.04□□□□□ -1.44
CopeO89079 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.04□□□□□ -1.44
CopeO89079 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.04□□□□□ -1.44
CopeO89079 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CopeO89079 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.04□□□□□ -1.44
CopeO89079 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.04□□□□□ -1.44
CopeO89079 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CopeO89079 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.03□□□□□ -1.44
CopeO89079 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm10936-201ENSMUST00000105264 252 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Gm14842-201ENSMUST00000119577 269 ntBASIC6.03□□□□□ -1.44
CopeO89079 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.03□□□□□ -1.44
CopeO89079 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.03□□□□□ -1.44
CopeO89079 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.03□□□□□ -1.44
CopeO89079 Mir1960-201ENSMUST00000157488 78 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm22311-201ENSMUST00000158006 110 ntBASIC6.03□□□□□ -1.44
CopeO89079 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CopeO89079 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.03□□□□□ -1.44
CopeO89079 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CopeO89079 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Mir8114-201ENSMUST00000183582 111 ntBASIC6.03□□□□□ -1.44
CopeO89079 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
CopeO89079 Gm28080-201ENSMUST00000188552 722 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Gm21524-201ENSMUST00000190499 696 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm21715-201ENSMUST00000191056 694 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm37716-201ENSMUST00000193553 947 ntBASIC6.03□□□□□ -1.44
CopeO89079 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.03□□□□□ -1.44
CopeO89079 Gm7181-201ENSMUST00000202197 434 ntBASIC6.03□□□□□ -1.44
CopeO89079 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.03□□□□□ -1.44
CopeO89079 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.03□□□□□ -1.44
CopeO89079 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.03□□□□□ -1.44
CopeO89079 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.03□□□□□ -1.44
CopeO89079 Gm18405-201ENSMUST00000220743 511 ntBASIC6.03□□□□□ -1.44
CopeO89079 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CopeO89079 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.03□□□□□ -1.44
CopeO89079 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.03□□□□□ -1.44
CopeO89079 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CopeO89079 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.03□□□□□ -1.44
CopeO89079 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.02□□□□□ -1.45
CopeO89079 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.02□□□□□ -1.45
CopeO89079 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CopeO89079 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CopeO89079 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CopeO89079 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.02□□□□□ -1.45
CopeO89079 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CopeO89079 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
CopeO89079 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CopeO89079 Gm23768-201ENSMUST00000104440 131 ntBASIC6.02□□□□□ -1.45
CopeO89079 Gm22499-201ENSMUST00000104501 135 ntBASIC6.02□□□□□ -1.45
CopeO89079 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.02□□□□□ -1.45
CopeO89079 Gm6434-201ENSMUST00000163316 372 ntBASIC6.02□□□□□ -1.45
CopeO89079 Gm20690-201ENSMUST00000177341 315 ntBASIC6.02□□□□□ -1.45
CopeO89079 Gm27004-201ENSMUST00000183300 727 ntBASIC6.02□□□□□ -1.45
CopeO89079 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CopeO89079 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CopeO89079 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CopeO89079 Gm28066-201ENSMUST00000188657 472 ntBASIC6.02□□□□□ -1.45
CopeO89079 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CopeO89079 Gm7804-202ENSMUST00000194187 854 ntBASIC6.02□□□□□ -1.45
CopeO89079 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.02□□□□□ -1.45
CopeO89079 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CopeO89079 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
CopeO89079 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CopeO89079 Gm24200-201ENSMUST00000082955 157 ntBASIC6.02□□□□□ -1.45
CopeO89079 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CopeO89079 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CopeO89079 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CopeO89079 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms