Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm9575-201ENSMUST00000122140 1339 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm12565-201ENSMUST00000119004 649 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm15238-201ENSMUST00000119938 1296 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm15696-201ENSMUST00000121730 445 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC4.82□□□□□ -1.64
Hmgb3O54879 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC4.82□□□□□ -1.64
Hmgb3O54879 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm23968-201ENSMUST00000175047 125 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Mir7033-201ENSMUST00000184259 81 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm27804-201ENSMUST00000185135 119 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm37265-201ENSMUST00000191698 885 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm43576-201ENSMUST00000197937 871 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm8291-201ENSMUST00000209635 1261 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm46364-201ENSMUST00000218548 319 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm18955-201ENSMUST00000223173 649 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm2614-201ENSMUST00000223227 403 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 AC154283.1-201ENSMUST00000228417 389 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Olfr687-201ENSMUST00000098154 938 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm44102-201ENSMUST00000204031 1666 ntBASIC4.82□□□□□ -1.64
Hmgb3O54879 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm23294-201ENSMUST00000104150 164 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm16007-201ENSMUST00000117837 286 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm14563-201ENSMUST00000120571 354 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm14349-201ENSMUST00000137155 902 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm24442-201ENSMUST00000157238 327 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm25435-201ENSMUST00000158277 267 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm24680-201ENSMUST00000158759 126 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm25675-201ENSMUST00000174979 118 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Mir8105-201ENSMUST00000184718 89 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm29592-201ENSMUST00000189434 370 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm37758-201ENSMUST00000194275 629 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm9504-201ENSMUST00000196322 468 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm6702-201ENSMUST00000208496 471 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm18255-201ENSMUST00000211316 765 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgb3O54879 AC105950.1-201ENSMUST00000222637 408 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 AC154250.1-201ENSMUST00000224775 489 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 CT009711.2-201ENSMUST00000225352 934 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 CT009539.1-201ENSMUST00000226465 220 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 AC156016.5-201ENSMUST00000228742 355 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgb3O54879 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.81□□□□□ -1.64
Hmgb3O54879 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Hmgb3O54879 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms