Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm22256-201ENSMUST00000102291 107 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Snord88a-201ENSMUST00000116723 90 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm13141-201ENSMUST00000117417 456 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm13924-201ENSMUST00000119899 486 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm12804-201ENSMUST00000121030 999 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm24176-201ENSMUST00000158928 121 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm9285-201ENSMUST00000177691 697 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm29489-201ENSMUST00000188934 324 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.52□□□□□ -1.53
CtcflA2APF3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm17895-201ENSMUST00000194028 874 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm37883-201ENSMUST00000194970 725 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm43089-201ENSMUST00000199162 275 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm44411-201ENSMUST00000204172 349 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm20997-201ENSMUST00000205148 231 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm7252-201ENSMUST00000223284 456 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm24621-201ENSMUST00000082679 140 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm6419-201ENSMUST00000097166 429 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CtcflA2APF3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.52□□□□□ -1.53
CtcflA2APF3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CtcflA2APF3 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm2178-201ENSMUST00000104927 357 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm12468-201ENSMUST00000116189 404 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm12135-201ENSMUST00000119170 466 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm15311-201ENSMUST00000119682 282 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm15305-201ENSMUST00000120354 288 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm23888-201ENSMUST00000122690 253 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CtcflA2APF3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm24949-201ENSMUST00000183609 215 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Mir6348-201ENSMUST00000183804 120 ntBASIC5.51□□□□□ -1.53
CtcflA2APF3 Gm19480-201ENSMUST00000185547 667 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms