Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb2S4R1M3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.01■□□□□ 0.47
H2afb2S4R1M3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Gm12933-201ENSMUST00000120203 872 ntBASIC18■□□□□ 0.47
H2afb2S4R1M3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18■□□□□ 0.47
H2afb2S4R1M3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18■□□□□ 0.47
H2afb2S4R1M3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
H2afb2S4R1M3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Rarb-207ENSMUST00000225921 2756 ntBASIC18■□□□□ 0.47
H2afb2S4R1M3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
H2afb2S4R1M3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb2S4R1M3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb2S4R1M3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb2S4R1M3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Gm26524-201ENSMUST00000192339 390 ntBASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Gm44549-201ENSMUST00000208351 577 ntBASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.97■□□□□ 0.47
H2afb2S4R1M3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
H2afb2S4R1M3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms