Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lhx9Q9WUH2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx9Q9WUH2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx9Q9WUH2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx9Q9WUH2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lhx9Q9WUH2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Gm11927-201ENSMUST00000118472 759 ntBASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx9Q9WUH2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.11■□□□□ 0.33
Lhx9Q9WUH2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx9Q9WUH2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx9Q9WUH2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx9Q9WUH2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx9Q9WUH2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.08■□□□□ 0.32
Lhx9Q9WUH2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms