Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a2Q9JLR1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a2Q9JLR1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a2Q9JLR1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a2Q9JLR1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a2Q9JLR1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a2Q9JLR1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a2Q9JLR1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sec61a2Q9JLR1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Gm6365-201ENSMUST00000054711 744 ntBASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sec61a2Q9JLR1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.15■□□□□ 0.18
Sec61a2Q9JLR1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sec61a2Q9JLR1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Sec61a2Q9JLR1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms