Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.55■□□□□ 0.08
Ssmem1Q9D9Y8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssmem1Q9D9Y8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Gm5643-201ENSMUST00000117081 966 ntBASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssmem1Q9D9Y8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
Ssmem1Q9D9Y8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.52■□□□□ 0.08
Ssmem1Q9D9Y8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssmem1Q9D9Y8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssmem1Q9D9Y8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssmem1Q9D9Y8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssmem1Q9D9Y8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Gm10138-203ENSMUST00000206952 366 ntBASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssmem1Q9D9Y8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssmem1Q9D9Y8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms